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7OR4

Crystal structure of DPP8 in complex with a 4-oxo-b-lactam based inhibitor, B142

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-02
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.00
Spacegroup nameP 61
Unit cell lengths149.443, 149.443, 269.388
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.740 - 2.440
R-factor0.2165
Rwork0.215
R-free0.25310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6eoo
RMSD bond length0.008
RMSD bond angle1.579
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.74049.7402.500
High resolution limit [Å]2.44021.9602.440
Rmerge0.0730.0351.255
Rmeas0.0760.0371.309
Total number of observations1661730
Number of reflections1260211629258
<I/σ(I)>22.9669.372.06
Completeness [%]100.089.5100
Redundancy13.18611.22812.204
CC(1/2)0.9990.9990.748
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2770.46 Na citrate

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