7OJP
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 245.627, 367.548, 370.677 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 105.720 - 2.840 |
R-factor | 0.2039 |
Rwork | 0.203 |
R-free | 0.21630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dem |
RMSD bond length | 0.014 |
RMSD bond angle | 1.759 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 105.720 | 105.790 | 2.890 |
High resolution limit [Å] | 2.840 | 7.720 | 2.840 |
Rmeas | 0.330 | 0.061 | 2.295 |
Rpim | 0.127 | 0.024 | 0.898 |
Number of reflections | 386908 | 20111 | 17369 |
<I/σ(I)> | 5.7 | 15.4 | 1 |
Completeness [%] | 99.5 | 100 | 89.8 |
Redundancy | 6.7 | 6.5 | 6.5 |
CC(1/2) | 0.982 | 0.997 | 0.445 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 278 | 1.6 M (NH4)2SO4, 10% 1,4-Dioxane, 0.1 M MES pH 6.7 |