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7OFP

Apo Structure of Mu2 Adaptin Subunit (Ap50) Of AP2 Clathrin Adaptor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-13
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.91587
Spacegroup nameP 65
Unit cell lengths123.830, 123.830, 112.668
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution77.680 - 1.920
R-factor0.1892
Rwork0.188
R-free0.21050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bxx
RMSD bond length0.018
RMSD bond angle1.254
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwareREFMAC (1.19rc1_4016)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]77.6801.950
High resolution limit [Å]1.9201.920
Rmerge0.2236.379
Rmeas0.2306.664
Rpim0.0551.912
Number of reflections747113642
<I/σ(I)>13.11
Completeness [%]99.998
Redundancy17.712.1
CC(1/2)0.9990.440
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7289Protein (10 mg/ml) and peptide (DVDEEGYSIKPETNQNDTKENHFYSS) (2mg/ml) were equilibrated against 1.5M Ammonium Sulphate 0.1M Hepes pH 7.0. Crystals were cryo-protected by soaking in mother liquor supplemented with 20% glycerol and peptide (peptide did not crystallise).

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PDB entries from 2024-05-15

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