7OFB
Keap1 kelch domain bound to a small molecule fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0723 |
Spacegroup name | P 61 |
Unit cell lengths | 103.364, 103.364, 55.485 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.160 - 2.400 |
R-factor | 0.1927 |
Rwork | 0.191 |
R-free | 0.22510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fnu |
RMSD bond length | 0.004 |
RMSD bond angle | 0.737 |
Data reduction software | XDS (v Jan 26, 2018) |
Data scaling software | XDS (v Jan 26, 2018) |
Phasing software | PHASER (1.13_2998) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.160 | 2.486 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.079 | 0.335 |
Rmeas | 0.086 | 0.363 |
Rpim | 0.033 | 0.139 |
Number of reflections | 13361 | 1308 |
<I/σ(I)> | 14.55 | 4.27 |
Completeness [%] | 99.9 | 99.69 |
Redundancy | 6.7 | 6.8 |
CC(1/2) | 0.997 | 0.975 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.5 M Ammonium sulfate, 0.1 M Sodium citrate tribasic dihydrate pH 5.6 and 1.0 M Lithium sulfate monohydrate |