7O31
Crystal structure of the anti-PAS Fab 1.2 in complex with its epitope peptide and the anti-Kappa VHH domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-27 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 0.91840 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 141.296, 44.373, 93.032 |
Unit cell angles | 90.00, 109.14, 90.00 |
Refinement procedure
Resolution | 33.390 - 1.550 |
R-factor | 0.1962 |
Rwork | 0.194 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7o2z 6ana |
RMSD bond length | 0.011 |
RMSD bond angle | 1.685 |
Data reduction software | XDS (16.8.2013) |
Data scaling software | XSCALE (Mar 15, 2019) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.390 | 33.390 | 1.650 |
High resolution limit [Å] | 1.550 | 10.000 | 1.550 |
Rmerge | 0.058 | 0.034 | 0.988 |
Rmeas | 0.063 | 0.037 | 1.070 |
Total number of observations | 535265 | ||
Number of reflections | 77314 | 317 | 12963 |
<I/σ(I)> | 15.03 | 46.81 | 1.64 |
Completeness [%] | 97.2 | 91.4 | 95.8 |
Redundancy | 6.923 | 6.233 | 6.777 |
CC(1/2) | 0.999 | 0.999 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 22% (w/v) PEG 3350 300 mM K-acetate |