7NXX
Structure of Superoxide Dismutase 1 (SOD1) in complex with nanobody 2 (Nb2).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2016-02-07 |
Detector | PSI JUNGFRAU 16M |
Wavelength(s) | 0.97923 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 115.830, 115.830, 83.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.915 - 2.189 |
R-factor | 0.2042 |
Rwork | 0.202 |
R-free | 0.24550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v0a |
RMSD bond length | 0.007 |
RMSD bond angle | 0.915 |
Data reduction software | Aimless |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.570 | 2.260 |
High resolution limit [Å] | 2.189 | 2.190 |
Number of reflections | 29792 | 2455 |
<I/σ(I)> | 12.6 | |
Completeness [%] | 99.1 | |
Redundancy | 12.8 | |
CC(1/2) | 0.998 | 0.825 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 273 | 0.1 M Hepes,1.5 M Lithium sulphate, pH 7.5 |