7NDU
Gag:02 TCR in complex with HLA-E featuring a non-natural amino acid
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 88.980, 88.980, 293.570 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.597 - 2.900 |
Rwork | 0.242 |
R-free | 0.30150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ndq |
RMSD bond length | 0.007 |
RMSD bond angle | 1.588 |
Data reduction software | XDS |
Data scaling software | DIALS |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.597 | 2.950 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.230 | 2.569 |
Rpim | 0.082 | 0.933 |
Number of reflections | 27166 | 1306 |
<I/σ(I)> | 8.6 | 1 |
Completeness [%] | 99.9 | 99.2 |
Redundancy | 8.8 | 8.3 |
CC(1/2) | 0.998 | 0.458 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 22.3% (w/v) PEG 1500, 89 mM MMT pH 9.0 |