7N0Z
Structure of PPM1H phosphatase with manganese ions at the active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.779, 101.159, 148.946 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.930 - 2.190 |
R-factor | 0.1962 |
Rwork | 0.195 |
R-free | 0.23100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7l4j |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 63.930 | 63.930 | 2.260 |
High resolution limit [Å] | 2.190 | 9.310 | 2.190 |
Rmerge | 0.090 | 0.037 | 1.007 |
Rmeas | 0.098 | 0.041 | 1.091 |
Rpim | 0.038 | 0.016 | 0.415 |
Number of reflections | 365198 | 840 | 4153 |
<I/σ(I)> | 12.7 | ||
Completeness [%] | 99.3 | 99.9 | 93.6 |
Redundancy | 6.7 | 6 | 6.7 |
CC(1/2) | 0.998 | 0.998 | 0.755 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 298 | 100mM Tris-Cl 15% reagent alcohol 10mM MnCl2 |