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7MZF

SARS-CoV-2 receptor binding domain bound to Fab PDI 37

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.953725
Spacegroup nameC 2 2 21
Unit cell lengths83.919, 147.665, 146.099
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.457 - 2.493
R-factor0.1872
Rwork0.185
R-free0.22720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6w41
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.15_3459)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.70048.7002.640
High resolution limit [Å]2.4907.3802.490
Rmerge0.1710.0521.586
Rmeas0.1800.0561.668
Total number of observations325436
Number of reflections3188413364951
<I/σ(I)>11.3333.231.44
Completeness [%]99.599.396.9
Redundancy10.2079.06210.288
CC(1/2)0.9970.9980.641
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.2 M ammonium sulphate, 20% PEG3350, 0.1 M Tris chloride pH 8.5

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PDB entries from 2024-05-15

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