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7MXG

PRMT5(M420T mutant):MEP50 complexed with inhibitor PF-06855800

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]95
Detector technologyPIXEL
Collection date2017-10-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 2
Unit cell lengths98.407, 138.451, 178.452
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution109.390 - 2.395
R-factor0.2297
Rwork0.227
R-free0.28200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7mxa
RMSD bond length0.008
RMSD bond angle1.000
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]109.3902.520
High resolution limit [Å]2.3902.390
Rmerge0.0820.690
Rpim0.0420.284
Number of reflections9638313880
<I/σ(I)>12.5
Completeness [%]99.8
Redundancy6.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP286Crystallization of full-length human PRMT5/MEP50 complexed with cofactor site inhibitors was performed at 13 degrees Celsius by hanging-drop vapor-diffusion methods. 2.5 ul of a solution of 5:1 molar ratio of inhibitor compound to PRMT5/MEP50 complex (13 mg/mL) was mixed with 2.5 ul of reservoir solution containing 13-15% (w/v) PEG3350, 0.1M MES, pH 6.5-7.5, 0.25M NaCl, and 20% (v/v) ethylene glycol.

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