7MNQ
Crystal Structure of the ZnF2 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.2829 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.820, 78.660, 56.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.130 - 2.050 |
R-factor | 0.1906 |
Rwork | 0.190 |
R-free | 0.20850 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.140 | 28.140 | 2.120 |
High resolution limit [Å] | 2.050 | 4.410 | 2.050 |
Rmeas | 0.104 | 0.058 | 2.088 |
Rpim | 0.029 | 0.016 | 0.607 |
Total number of observations | 215148 | 22091 | 17443 |
Number of reflections | 17126 | 1854 | 1596 |
<I/σ(I)> | 13.9 | 36.4 | 1.2 |
Completeness [%] | 99.4 | 100 | 95.6 |
Redundancy | 12.6 | 11.9 | 10.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 21% (w/v) PEG 3350; 0.1 M Bis-Tris |