7MNP
Crystal Structure of the ZnF2 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.230, 79.840, 108.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.020 - 2.050 |
R-factor | 0.196 |
Rwork | 0.194 |
R-free | 0.23140 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.020 | 29.030 | 2.130 |
High resolution limit [Å] | 2.050 | 4.420 | 2.050 |
Rmeas | 0.127 | 0.045 | 1.468 |
Rpim | 0.038 | 0.013 | 0.467 |
Total number of observations | 36729 | 28669 | |
Number of reflections | 62430 | 3537 | 3140 |
<I/σ(I)> | 12.5 | 35.9 | 1.6 |
Completeness [%] | 99.4 | 99.7 | 95.3 |
Redundancy | 10.9 | 10.4 | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 294 | 17 % (w/v) PEG 3,350; 0.1M Bis-Tris |