7MK1
Structure of a protein-modified aptamer complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.126, 86.632, 87.126 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.750 - 1.900 |
R-factor | 0.1901 |
Rwork | 0.188 |
R-free | 0.21960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3og8 |
RMSD bond length | 0.019 |
RMSD bond angle | 4.332 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.750 | 1.968 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.030 | |
Rmeas | 0.043 | |
Rpim | 0.030 | |
Number of reflections | 46578 | 4608 |
<I/σ(I)> | 10.72 | |
Completeness [%] | 99.8 | 99.96 |
Redundancy | 2 | 2 |
CC(1/2) | 0.999 | 0.549 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 285.15 | 30% PEG3350, 0.01 M Na acetate pH 4.8 |