7MJ5
complex of human thrombin with XC-43
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 113.350, 136.320, 193.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.240 - 2.150 |
R-factor | 0.1659 |
Rwork | 0.165 |
R-free | 0.19270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ppb |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.240 | 44.240 | 2.210 |
High resolution limit [Å] | 2.150 | 9.620 | 2.150 |
Rmerge | 0.085 | 0.035 | 0.697 |
Rmeas | 0.089 | 0.036 | 0.729 |
Total number of observations | 1825903 | ||
Number of reflections | 163186 | 2015 | 11958 |
<I/σ(I)> | 18.27 | 41.36 | 4.22 |
Completeness [%] | 99.9 | 99.4 | 100 |
Redundancy | 11.189 | 10.293 | 11.598 |
CC(1/2) | 0.999 | 0.999 | 0.942 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2 M magnesium acetate, 9 % PEG 8000 |