7MG6
Concanavalin A bound to a DNA glycoconjugate, Man-AGCT
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-02-25 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0782 |
| Spacegroup name | P 21 2 21 |
| Unit cell lengths | 65.729, 70.890, 125.839 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 70.890 - 1.700 |
| R-factor | 0.178 |
| Rwork | 0.177 |
| R-free | 0.20700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1jbc |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.689 |
| Data reduction software | iMOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 70.890 | 1.790 |
| High resolution limit [Å] | 1.700 | 1.700 |
| Rmerge | 0.098 | 0.240 |
| Number of reflections | 61815 | 9422 |
| <I/σ(I)> | 2.7065 | |
| Completeness [%] | 99.6 | 100 |
| Redundancy | 8.75 | 9.03 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | Sitting drop comprising 1 uL of Concanavalin A (40 uM) and Man-AGCT (160 uM) + 1 uL crystallization condition (Helix screen, condition D3: 0.2 M lithium sulfate, 0.05 M bis Tris (pH 7), 20% v/v MPD). Reservoir contained 70 uL of crystallization condition. |






