7MFI
Bovine sigma-2 receptor bound to cholesterol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-08-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 70.873, 54.894, 93.007 |
Unit cell angles | 90.00, 94.30, 90.00 |
Refinement procedure
Resolution | 47.240 - 2.810 |
Rwork | 0.240 |
R-free | 0.27810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m93 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.590 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.322 | 2.200 |
Rmeas | 0.350 | 2.383 |
Rpim | 0.134 | 0.900 |
Number of reflections | 17737 | 1752 |
<I/σ(I)> | 5.35 | 0.94 |
Completeness [%] | 99.7 | 98.54 |
Redundancy | 6.7 | 6.9 |
CC(1/2) | 0.992 | 0.426 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 6 | 293 | PEG 300 400 mM Na Citrate 100 mM MES pH 6 1,2,3 heptanetriol |