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7M9F

Structure of the wild-type native full-length HIV-1 capsid protein in complex with ZW-1261

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-07
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00000
Spacegroup nameP 6
Unit cell lengths90.900, 90.900, 56.140
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.710 - 2.700
R-factor0.1728
Rwork0.169
R-free0.25330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4xfz
RMSD bond length0.017
RMSD bond angle1.893
Data reduction softwareXDS (Jan 31, 2020)
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER (2.7.17)
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.71045.7102.770
High resolution limit [Å]2.70012.0802.700
Rmerge0.1080.0580.768
Rmeas0.1180.0620.840
Total number of observations52178
Number of reflections723969502
<I/σ(I)>13.6233.73.39
Completeness [%]97.973.491.1
Redundancy7.2087.9286.064
CC(1/2)0.9960.9990.783
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291PEG 3350, NaI, Sodium Cacodylate, Glycerol

219869

PDB entries from 2024-05-15

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