7LUB
Crystal structure of recombinant human fumarase in complex with D-2-amino-3-phosphono-propionic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-03 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.3236 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 190.903, 190.903, 116.243 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.850 - 2.150 |
R-factor | 0.1869 |
Rwork | 0.186 |
R-free | 0.20880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5upp |
RMSD bond length | 0.003 |
RMSD bond angle | 1.266 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.850 | 2.200 |
High resolution limit [Å] | 2.150 | 2.150 |
Number of reflections | 67921 | 4478 |
<I/σ(I)> | 15 | 1.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 39.2 | |
CC(1/2) | 0.999 | 0.458 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 294 | 100 mM Hepes pH 7.5, 1% v/v 2-methylpentanediol and 16% m/v PEG 10 K |