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7LRH

C-terminal domain of RibD from Brucella abortus (5-amino-6-ribosylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate reductase)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-26
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9801
Spacegroup nameP 1
Unit cell lengths54.910, 56.700, 79.600
Unit cell angles95.99, 91.25, 113.16
Refinement procedure
Resolution50.360 - 1.920
R-factor0.2361
Rwork0.234
R-free0.27410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2b3z
RMSD bond length0.014
RMSD bond angle1.644
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareBALBES
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.3601.970
High resolution limit [Å]1.9201.920
Rmerge0.0852.624
Rmeas0.0892.738
Rpim0.0260.779
Number of reflections656074379
<I/σ(I)>12.11
Completeness [%]98.196.9
Redundancy11.812.2
CC(1/2)0.9990.528
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.229412% (w/v) PEG 8000 + 0.1 M MES pH 6,2 + 0.2 M ammonium sulfate

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PDB entries from 2024-05-15

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