7LEN
Crystal structure of the epidermal growth factor receptor extracellular region with R84K mutation in complex with epiregulin crystallized with trehalose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.03318 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.737, 86.600, 197.795 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.480 - 2.900 |
R-factor | 0.2396 |
Rwork | 0.237 |
R-free | 0.29460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wb7 |
Data reduction software | XDS (20200417) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.480 | 2.980 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.134 | 1.349 |
Rmeas | 0.146 | 1.467 |
Rpim | 0.056 | 0.572 |
Number of reflections | 30250 | 4148 |
<I/σ(I)> | 10.9 | 1.3 |
Completeness [%] | 99.8 | 97.4 |
Redundancy | 6.7 | 6.5 |
CC(1/2) | 0.997 | 0.489 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.15 | 8 mg/ml protein, 100 mM HEPES (pH 7.5), 12% PEG3350, with 3% (w/v) D-(+)-trehalose dihydrate |