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7LDA

Crystal structure of a ribose-5-phosphate isomerase from Stenotrophomonas maltophilia K279a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2020-02-27
DetectorRAYONIX MX-300
Wavelength(s)0.9787
Spacegroup nameP 41 21 2
Unit cell lengths97.410, 97.410, 129.280
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.580 - 1.450
R-factor0.1495
Rwork0.149
R-free0.16310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3enq
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.19rc4-4035)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.58045.5801.490
High resolution limit [Å]1.4506.4801.450
Rmerge0.0630.0290.601
Rmeas0.0670.0310.637
Total number of observations1011070
Number of reflections11011613708042
<I/σ(I)>19.1642.423.62
Completeness [%]99.997.6100
Redundancy9.1828.3589.263
CC(1/2)0.9990.9990.899
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5287StmaA.00944.a.B1.PW38722 at 29.2 mg/mL against MCSG1 screen condition G5: 0.1 M BisTris HCl pH6.5, 2.0M ammonium sulfate supplemented with 25% ethylene glycol as cryo, unique puck ID xqs9-4, 313871g5

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