7LC2
Crystal Structure of KRAS4b-Q61R (GMPPNP-bound) in complex with the RAS-binding domain (RBD) of SIN1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 150.000, 45.640, 91.780 |
Unit cell angles | 90.00, 119.52, 90.00 |
Refinement procedure
Resolution | 45.470 - 2.700 |
R-factor | 0.2433 |
Rwork | 0.238 |
R-free | 0.28740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vjj |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.470 | 45.470 | 2.850 |
High resolution limit [Å] | 2.700 | 8.540 | 2.700 |
Rmerge | 0.102 | 0.049 | 1.006 |
Rmeas | 0.111 | 0.053 | 1.088 |
Total number of observations | 100465 | ||
Number of reflections | 15142 | 521 | 2233 |
<I/σ(I)> | 11.57 | 25.45 | 2.23 |
Completeness [%] | 99.5 | 98.7 | 99.7 |
Redundancy | 6.635 | 5.973 | 6.918 |
CC(1/2) | 0.997 | 0.998 | 0.742 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 100mM MMT buffer (DL-malic acid, MES and Tris base in 1:2:2 ratio) pH 5, 25% PEG (polyethylene glycol) 1500 |