7L7E
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-03 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97857 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 97.152, 152.525, 199.244 |
Unit cell angles | 90.00, 94.74, 90.00 |
Refinement procedure
Resolution | 34.780 - 3.000 |
R-factor | 0.2182 |
Rwork | 0.215 |
R-free | 0.27290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 6XC2 & 5JRP |
RMSD bond length | 0.002 |
RMSD bond angle | 0.598 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.210 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.231 | 0.810 |
Number of reflections | 115751 | 16908 |
<I/σ(I)> | 6.4 | |
Completeness [%] | 99.9 | |
Redundancy | 7.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 5% PEG1000, 40% reagent alcohol, 0.1 M sodium phosphate dibasic/citric acid, pH 4.2 |