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7L32

Molybdopterin biosynthesis MoaE protein from Burkholderia ambifaria MC40-6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2020-07-30
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameC 1 2 1
Unit cell lengths111.680, 93.290, 65.250
Unit cell angles90.00, 90.10, 90.00
Refinement procedure
Resolution48.250 - 1.900
R-factor0.1801
Rwork0.179
R-free0.20310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qie as per Morda
RMSD bond length0.008
RMSD bond angle0.847
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX (1.19RC4-4035)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.950
High resolution limit [Å]1.9008.5001.900
Rmerge0.0480.0300.392
Rmeas0.0560.0350.474
Number of reflections520766143372
<I/σ(I)>16.2633.773.04
Completeness [%]98.897.987.4
Redundancy3.6723.3932.991
CC(1/2)0.9990.9980.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5287Molecular Dimensions Morpheus screen, B5:10% w/v PEG 20 000, 20% v/v PEG MME 550 0.03 M of each sodium fluoride, sodium bromide, sodium iodide 0.1 M MOPS/HEPES-Na pH 7.5: BuamA.00098.a.B1.PS37913 at 49.6 mg/ml + 0.5% n-Octyl-??-D-glucopyranoside: cryo: direct: tray 317329b5, puck xxu3-9

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PDB entries from 2024-05-15

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