Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KUM

LNA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]99
Detector technologyPIXEL
Collection date2020-06-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.977408
Spacegroup nameP 3 2 1
Unit cell lengths47.769, 47.769, 84.122
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 1.714
Rwork0.205
R-free0.22020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5uee
RMSD bond length0.027
RMSD bond angle3.048
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.740
High resolution limit [Å]1.7101.710
Rmerge0.0520.475
Rmeas0.0540.489
Rpim0.0130.115
Number of reflections12474607
<I/σ(I)>52.36.9
Completeness [%]100.0
Redundancy18.817.5
CC(1/2)0.9940.994
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62930.1 M Sodium acetate trihydrate pH 4.6, 2.0 M Sodium formate, 50 mM Magnesium chloride

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon