7KRI
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95374 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 109.459, 109.459, 77.046 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.620 - 1.580 |
R-factor | 0.1786 |
Rwork | 0.178 |
R-free | 0.19530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6w9q |
RMSD bond length | 0.006 |
RMSD bond angle | 0.861 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.620 | 1.610 |
High resolution limit [Å] | 1.580 | 1.580 |
Rpim | 0.026 | 0.619 |
Number of reflections | 73088 | 3604 |
<I/σ(I)> | 13.4 | |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 5.2 | 10.5 |
CC(1/2) | 0.999 | 0.602 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4 | 293 | 0.1M Sodium Citrate pH 4.0 2.2-2.4M Sodium Malonate |