7KRG
Crystal Structure of Mannitol Dehydrogenase (ChMDH) from Cladosporium herbarum in complex with NADP+ and Na
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 88.867, 119.322, 111.211 |
Unit cell angles | 90.00, 94.88, 90.00 |
Refinement procedure
Resolution | 31.405 - 2.038 |
R-factor | 0.154547684041 |
Rwork | 0.154 |
R-free | 0.18292 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gdf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.829 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.090 |
High resolution limit [Å] | 2.038 | 2.038 |
Rmeas | 0.137 | |
Number of reflections | 141106 | 7165 |
<I/σ(I)> | 16.6 | |
Completeness [%] | 97.6 | |
Redundancy | 2.9 | |
CC(1/2) | 0.656 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 25% PEG 1500, 100 mM sodium propionate/sodium cacodylate/BIS-TRIS propane (2:1:2 molar ratio), pH 7, 5 mM NADP+ |