Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KRD

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 4-(3-chloro-5-cyanophenoxy)-3-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenyl sulfurofluoridate (JLJ702)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-2
Synchrotron siteNSLS-II
Beamline17-ID-2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-17
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths224.403, 69.471, 104.764
Unit cell angles90.00, 105.81, 90.00
Refinement procedure
Resolution29.232 - 2.700
R-factor0.2222
Rwork0.220
R-free0.26800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5tw3
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.23229.2322.860
High resolution limit [Å]2.7007.8402.700
Rmerge0.0740.0211.754
Rmeas0.0800.0221.892
Total number of observations299064
Number of reflections4298318096870
<I/σ(I)>17.0673.531.03
Completeness [%]99.897.599.7
Redundancy6.9586.7777.16
CC(1/2)0.9991.0000.652
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27750 mM imidazole pH 6.5, 18% PEG 8,000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon