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7KNZ

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, E88A mutant with pyruvate bound in the active site and R,R-bislysine at the allosteric site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-29
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths85.120, 231.210, 200.120
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.910 - 2.280
R-factor0.1813
Rwork0.179
R-free0.21560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ly8
Data reduction softwareHKL-3000
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.9102.361
High resolution limit [Å]2.2802.280
Rmerge0.835
Number of reflections899818836
<I/σ(I)>10.56
Completeness [%]99.999.18
Redundancy15
CC(1/2)0.995
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH7.4288.150.5 M Magnesium acetate, 8 % PEG 8000, 0.1 M Sodium acetate (pH 7.4), 120 mM R,R-bisLysine

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PDB entries from 2025-12-10

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