7KLJ
Crystal structure of the WD-repeat domain of human KIF21A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-09-20 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.275, 67.067, 79.880 |
Unit cell angles | 90.00, 94.43, 90.00 |
Refinement procedure
Resolution | 20.200 - 1.520 |
R-factor | 0.1705 |
Rwork | 0.170 |
R-free | 0.18490 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.439 |
Data scaling software | HKL-3000 |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.550 |
High resolution limit [Å] | 1.520 | 4.130 | 1.520 |
Rmerge | 0.073 | 0.044 | 0.424 |
Rmeas | 0.078 | 0.048 | 0.487 |
Rpim | 0.029 | 0.018 | 0.233 |
Total number of observations | 600649 | ||
Number of reflections | 89050 | 4569 | 3875 |
<I/σ(I)> | 12.2 | ||
Completeness [%] | 99.3 | 98.9 | 87.1 |
Redundancy | 6.7 | 7 | 3.9 |
CC(1/2) | 0.999 | 0.821 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 293 | 25% PEG3350, 0.2 M ammonium acetate, 0.1 M HEPES, pH 7.4 |