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7KKT

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84D mutant with pyruvate bound in the active site and R,R-bislysine bound at the allosteric site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-05
DetectorPSI PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths85.020, 225.470, 200.420
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.129 - 1.710
R-factor0.1652
Rwork0.164
R-free0.19510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ly8
RMSD bond length0.009
RMSD bond angle1.036
Data reduction softwareHKL-3000
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (dev_2398)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1291.771
High resolution limit [Å]1.7101.710
Rmerge0.330
Number of reflections20320717773
<I/σ(I)>15.43
Completeness [%]98.386.34
Redundancy15
CC(1/2)0.990
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH7.4288.150.7 M Magnesium acetate, 10 % PEG8000, 0.1 M Sodium acetate (pH 7.4), 120 mMR,R-BisLysine

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PDB entries from 2024-05-15

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