7KBC
The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D (construct with truncated loop 51-72) in complex with baloxavir acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.963, 89.963, 133.943 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.980 - 2.250 |
R-factor | 0.1969 |
Rwork | 0.195 |
R-free | 0.22800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
RMSD bond length | 0.006 |
RMSD bond angle | 1.162 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_3965) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.980 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.048 | 0.618 |
Rmeas | 0.086 | |
Rpim | 0.027 | 0.377 |
Number of reflections | 12694 | 768 |
<I/σ(I)> | 12.7 | 1.4 |
Completeness [%] | 94.9 | 65.3 |
Redundancy | 5.1 | |
CC(1/2) | 0.998 | 0.692 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |