7K47
Crystal Structure of Glucosamine-1-phosphate N-acetyltransferase from Stenotrophomonas maltophilia K279a
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2020-07-16 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97856 |
| Spacegroup name | P 63 |
| Unit cell lengths | 91.290, 91.290, 184.550 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 29.880 - 2.900 |
| R-factor | 0.1774 |
| Rwork | 0.174 |
| R-free | 0.20540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | two domains of PDB entry 5vmk as per Morda |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.610 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MoRDa |
| Refinement software | PHENIX (1.18.2) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.980 |
| High resolution limit [Å] | 2.900 | 12.970 | 2.900 |
| Rmerge | 0.051 | 0.037 | 0.543 |
| Rmeas | 0.054 | 0.040 | 0.568 |
| Number of reflections | 19333 | 223 | 1433 |
| <I/σ(I)> | 30.57 | 52.9 | 4.83 |
| Completeness [%] | 99.9 | 95.7 | 100 |
| Redundancy | 11.482 | 8.91 | 11.585 |
| CC(1/2) | 1.000 | 0.999 | 0.947 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 287 | Optimization screen based on Rigaku Reagens JCSG+ condition B4: 100mM HEPES free acid / Sodium hydroxide pH 8.0, 8% (V/V) ethylene glycol, 9.6% (w/V) PEG 8000: StmaA.00150.a.B1.PW38698 at 24mg/ml: tray 319930h10: cryo: 20% EG in 2 steps: puck aod1-6 |






