7K42
Crystal structure of the second bromodomain (BD2) of human TAF1 bound to dioxane
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-10 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.060, 57.180, 124.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.280 - 1.700 |
R-factor | 0.1623 |
Rwork | 0.162 |
R-free | 0.18950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jsp |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.280 | 62.280 | 1.740 |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.030 | 0.016 | 0.393 |
Rmeas | 0.035 | 0.018 | 0.491 |
Total number of observations | 159577 | ||
Number of reflections | 44531 | 543 | 3043 |
<I/σ(I)> | 24.6 | 78.02 | 2.41 |
Completeness [%] | 97.5 | 91 | 91.2 |
Redundancy | 3.584 | 4.621 | 2.624 |
CC(1/2) | 1.000 | 1.000 | 0.814 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M Potassium sodium tartrate tetrahydrate, 0.1 M Sodium acetate tribasic dihydrate pH 5.6, 2.0 M Ammonium sulfate, 25% v/v Ethylene glycol |