7K1U
Crystal Structure of SrtB-anchored Collagen-binding Adhesin Fragment (residues 206-565) from Clostridioides difficile strain 630
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-05-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 69.323, 69.323, 187.527 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.640 - 2.400 |
R-factor | 0.1759 |
Rwork | 0.174 |
R-free | 0.21730 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.426 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.090 | 0.834 |
Rmeas | 0.096 | 0.896 |
Rpim | 0.036 | 0.326 |
Number of reflections | 21161 | 1018 |
<I/σ(I)> | 22 | 1.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.2 | 7.4 |
CC(1/2) | 0.997 | 0.878 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292 | Protein: 9.3 mg/ml 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: Classics II (G7), 0.2M Ammonium acetate, 0.1M Bis-Tris pH 6.5, 25% (w/v) PEG 3350 |