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7K1U

Crystal Structure of SrtB-anchored Collagen-binding Adhesin Fragment (residues 206-565) from Clostridioides difficile strain 630

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2020-05-13
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 31 2 1
Unit cell lengths69.323, 69.323, 187.527
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.640 - 2.400
R-factor0.1759
Rwork0.174
R-free0.21730
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle1.426
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.440
High resolution limit [Å]2.4002.400
Rmerge0.0900.834
Rmeas0.0960.896
Rpim0.0360.326
Number of reflections211611018
<I/σ(I)>221.8
Completeness [%]100.0100
Redundancy7.27.4
CC(1/2)0.9970.878
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5292Protein: 9.3 mg/ml 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: Classics II (G7), 0.2M Ammonium acetate, 0.1M Bis-Tris pH 6.5, 25% (w/v) PEG 3350

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