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7JWS

Crystal structure of human ALDH1A1 bound to compound (R)-28

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2017-03-25
DetectorADSC QUANTUM 210r
Wavelength(s)0.98
Spacegroup nameP 4 2 2
Unit cell lengths109.065, 109.065, 83.126
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution109.070 - 1.600
R-factor0.2229
Rwork0.222
R-free0.24730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6dum
RMSD bond length0.008
RMSD bond angle1.285
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]109.07050.0001.630
High resolution limit [Å]1.6004.3401.600
Rmerge0.0810.0550.671
Rmeas0.0860.0580.731
Rpim0.0270.0190.285
Number of reflections6617235463063
<I/σ(I)>11.72.3
Completeness [%]99.497.893.5
Redundancy9.38.95.9
CC(1/2)0.9980.850
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.4293100 mM sodium BisTris, pH 6.4, 9% PEG3350, 200 mM NaCl, and 5-10 mM YbCl3, 250 uM (R)-1-methyl-5-phenyl-6-((1-phenylethyl)thio)-1H-pyrazolo[3,4-d]pyrimidin-4(5H)-one, 1% v/v DMSO

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