7JR6
H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-05-18 |
| Detector | MARRESEARCH |
| Wavelength(s) | 0.97949 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 48.872, 67.997, 69.096 |
| Unit cell angles | 90.00, 96.83, 90.00 |
Refinement procedure
| Resolution | 37.570 - 1.880 |
| R-factor | 0.179 |
| Rwork | 0.176 |
| R-free | 0.22270 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.680 |
| Data reduction software | autoPROC |
| Data scaling software | STARANISO |
| Phasing software | PHENIX |
| Refinement software | BUSTER |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.570 | 1.947 |
| High resolution limit [Å] | 1.880 | 1.880 |
| Rmerge | 0.064 | 1.048 |
| Number of reflections | 34104 | 1625 |
| <I/σ(I)> | 11.35 | 1.25 |
| Completeness [%] | 82.5 | 44.44 |
| Redundancy | 3.8 | 3.7 |
| CC(1/2) | 0.932 | 0.592 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | Protein diluted to 10mG/mL in 15mM GSH, 50mM TRIS pH 7.5, 50mM NaCl, 25mM MgCl2, 5mM DTT, 1mM EDTA Well Buffer 22% PEG 6K, 1% 1,4 DIOXANE, 10mM DTT, 5% Glycerol, 50mM TRIS pH 8.5 |






