7JQG
Crystal structure of human PPARgamma ligand binding domain Y473E mutant in complex with GW1929
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.699, 61.625, 118.660 |
Unit cell angles | 90.00, 102.44, 90.00 |
Refinement procedure
Resolution | 39.380 - 2.150 |
R-factor | 0.2276 |
Rwork | 0.225 |
R-free | 0.27000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1prg |
Data reduction software | DIALS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.380 | 2.227 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.013 | 0.196 |
Rmeas | 0.019 | 0.277 |
Rpim | 0.013 | 0.196 |
Number of reflections | 35158 | 3506 |
<I/σ(I)> | 22 | 3.49 |
Completeness [%] | 98.2 | |
Redundancy | 2 | 2 |
CC(1/2) | 0.999 | 0.934 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 293 | 0.1M MOPS, pH 7.4, 0.8M SODIUM CITRATE |