7JPI
Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | H 3 2 |
Unit cell lengths | 114.583, 114.583, 312.379 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.000 - 2.280 |
R-factor | 0.2015 |
Rwork | 0.200 |
R-free | 0.23700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jq3 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.528 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.050 | 2.340 |
High resolution limit [Å] | 2.280 | 2.280 |
Number of reflections | 34904 | 1725 |
<I/σ(I)> | 8 | 0.9 |
Completeness [%] | 96.4 | 97.3 |
Redundancy | 4.5 | |
CC(1/2) | 0.781 | 0.325 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.M Sodium citrate, 10% PEG w/v 6000 |