Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7JMQ

The external aldimine form of the mutant beta-S377A Salmonella thypi tryptophan synthase in open conformation showing dual side chain conformations for the residue beta-Q114, sodium ion at the metal coordination site, and F9 inhibitor at the alpha-site. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2019-12-07
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths181.380, 58.244, 67.154
Unit cell angles90.00, 94.33, 90.00
Refinement procedure
Resolution38.860 - 1.600
R-factor0.1593
Rwork0.158
R-free0.18360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6c73
RMSD bond length0.007
RMSD bond angle1.523
Data reduction softwarexia2
Data scaling softwareSCALA (3.3.22)
Phasing softwareMOLREP (11.7.02)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]90.43138.8581.690
High resolution limit [Å]1.5995.0601.600
Rmerge0.0430.0310.132
Rmeas0.0650.0510.179
Rpim0.0360.0290.101
Total number of observations915031090
Number of reflections85831301610609
<I/σ(I)>12.819.36.1
Completeness [%]93.299.179.4
Redundancy3.132.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.629850 mM Bicine-CsOH, 8% PEG 8,000, 6 mM Spermine, pH 7.6

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon