7JG3
Human GAR transformylase in complex with GAR substrate and AGF103 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2020-05-29 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 74.522, 74.522, 100.060 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.541 - 2.091 |
R-factor | 0.1891 |
Rwork | 0.187 |
R-free | 0.23270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j9f |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (v1.13) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.541 | 2.150 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.143 | 1.757 |
Rmeas | 0.151 | 1.858 |
Rpim | 0.047 | 0.907 |
Number of reflections | 18747 | 18747 |
<I/σ(I)> | 14.1 | 1.1 |
Completeness [%] | 99.8 | 97.7 |
Redundancy | 10.3 | 9.4 |
CC(1/2) | 0.998 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 0.1 M Tris (pH 7.5), 0.333 mM NaCl, 20% polyethylene glycol (PEG) 4000, and 2% PEG 400 |