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7EM8

Crystal structure of the PI5P4Kbeta T201M-2a-ATP complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]95
Detector technologyPIXEL
Collection date2019-03-01
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameC 2 2 21
Unit cell lengths109.487, 184.854, 106.735
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.220 - 3.050
R-factor0.2124
Rwork0.209
R-free0.27470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6k4h
RMSD bond length0.010
RMSD bond angle1.196
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.9703.210
High resolution limit [Å]3.0503.050
Rmerge0.0700.909
Number of reflections210002938
<I/σ(I)>24.15
Completeness [%]99.9100
Redundancy8.88.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.12939%(w/v) PEG4000, 0.1M sodium citrate pH 6.0, 0.1M magnesium acetate, 0.1M lithium acetate

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