7EJM

Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-229E) spike protein

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SPRING-8 BEAMLINE BL26B2
Synchrotron site	SPring-8
Beamline	BL26B2
Temperature [K]	100
Detector technology	CCD
Collection date	2021-01-28
Detector	RAYONIX MX225HE
Wavelength(s)	1.000
Spacegroup name	P 21 21 21
Unit cell lengths	67.946, 85.586, 91.091
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	45.950 - 1.710
R-factor	0.1929
Rwork	0.192
R-free	0.22100
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4f7m
RMSD bond length	0.007
RMSD bond angle	0.826
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER
Refinement software	PHENIX (1.13_2998)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	45.950	1.770
High resolution limit [Å]	1.710	1.710
Rmerge	0.096
Number of reflections	111576	11121
<I/σ(I)>	13.5
Completeness [%]	100.0
Redundancy	7.7
CC(1/2)	0.999	0.492

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		293	Na citrate, PEG 3350