7EIN
SARS-CoV-2 main proteinase complex with microbial metabolite leupeptin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-30 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.041, 53.125, 113.635 |
Unit cell angles | 90.00, 101.05, 90.00 |
Refinement procedure
Resolution | 47.960 - 1.700 |
R-factor | 0.2366 |
Rwork | 0.235 |
R-free | 0.26020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7c6s |
RMSD bond length | 0.009 |
RMSD bond angle | 0.796 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.063 | 0.063 |
Number of reflections | 59085 | 59085 |
<I/σ(I)> | 29.9 | |
Completeness [%] | 100.0 | |
Redundancy | 6.8 | |
CC(1/2) | 0.999 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 20% PEG 1500, 0.1 M BIS-TRIS, pH 6.5 |