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7EFL

Crystal structure of the gastric proton pump K791S in (BYK)E2BeF state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]80
Detector technologyPIXEL
Collection date2018-11-28
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 31 2 1
Unit cell lengths104.970, 104.970, 369.940
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.290 - 3.400
R-factor0.2329
Rwork0.230
R-free0.28890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ylv
RMSD bond length0.012
RMSD bond angle1.338
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER (1.19_4092)
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2903.500
High resolution limit [Å]3.4003.400
Rmerge0.1652.480
Rpim0.0390.548
Number of reflections335643274
<I/σ(I)>12.4
Completeness [%]99.899.8
Redundancy2021.1
CC(1/2)0.9900.790
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529310% glycerol, 20% PEG 2000 MME, 0.2M KCl, 3% methylpentanediol, 5mM beta-mercaptoethanol

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