7EEZ
crystal structure of maize SHH2 SAWADEE domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 47.262, 47.262, 137.568 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.953 - 1.902 |
R-factor | 0.2215 |
Rwork | 0.221 |
R-free | 0.23620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4iur |
RMSD bond length | 0.004 |
RMSD bond angle | 0.775 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.079 | 0.045 | 0.720 |
Rmeas | 0.082 | 0.046 | 0.744 |
Rpim | 0.021 | 0.012 | 0.185 |
Total number of observations | 201808 | ||
Number of reflections | 13044 | 1474 | 1275 |
<I/σ(I)> | 8.8 | ||
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 15.5 | 13.8 | 15 |
CC(1/2) | 0.999 | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Bis-Tris, pH 6.5, 30% PEG 300 |