Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ECO

RNA duplex containing U-Ag-U base pairs

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-09
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.98
Spacegroup nameC 1 2 1
Unit cell lengths95.771, 26.875, 78.944
Unit cell angles90.00, 101.69, 90.00
Refinement procedure
Resolution36.910 - 1.810
R-factor0.1882
Rwork0.185
R-free0.21690
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.91036.9101.860
High resolution limit [Å]1.8108.0901.810
Rmerge0.0590.0400.388
Rmeas0.0640.0440.425
Total number of observations118980
Number of reflections184832361350
<I/σ(I)>17.7732.815.16
Completeness [%]99.797.599.2
Redundancy6.4375.756.054
CC(1/2)0.9990.9990.971
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293MOPS, MPD, spermine, lithium nitrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon