7EBL
Bacterial STING in complex with c-di-GMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-10 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.9998 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.247, 98.599, 50.655 |
Unit cell angles | 90.00, 108.18, 90.00 |
Refinement procedure
Resolution | 24.180 - 2.170 |
R-factor | 0.1794 |
Rwork | 0.177 |
R-free | 0.23110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ebd |
RMSD bond length | 0.004 |
RMSD bond angle | 0.810 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.250 |
High resolution limit [Å] | 2.170 | 2.170 |
Rmerge | 0.082 | 0.320 |
Rpim | 0.052 | 0.215 |
Number of reflections | 17092 | 1680 |
<I/σ(I)> | 15.7 | 3.1 |
Completeness [%] | 98.3 | 96.9 |
Redundancy | 3.5 | 3 |
CC(1/2) | 0.859 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.1M sodium cacodylate trihydrate pH 6.5, 0.2M sodium acetate trihydrate, 15% w/v polyethylene glycol 8000 |