Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7E9S

Archaeal oligosaccharyltransferase AglB from Archaeoglobus fulgidus in complex with an inhibitory peptide and a dolichol-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-20
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0000
Spacegroup nameP 21 21 2
Unit cell lengths345.740, 48.690, 63.560
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.840 - 2.700
R-factor0.2171
Rwork0.215
R-free0.25220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gmy
RMSD bond length0.003
RMSD bond angle0.592
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4002.800
High resolution limit [Å]2.7002.700
Rmerge0.4328.718
Rmeas0.4358.776
Number of reflections306773054
<I/σ(I)>13.61.3
Completeness [%]100.099.9
Redundancy79.576.9
CC(1/2)0.9980.756
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE629350 mM NaCl, 0.1 M Na-citrate, pH 6.0, 18-22 % PEG400

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon