7E9S
Archaeal oligosaccharyltransferase AglB from Archaeoglobus fulgidus in complex with an inhibitory peptide and a dolichol-phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 345.740, 48.690, 63.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.840 - 2.700 |
R-factor | 0.2171 |
Rwork | 0.215 |
R-free | 0.25220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gmy |
RMSD bond length | 0.003 |
RMSD bond angle | 0.592 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.400 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.432 | 8.718 |
Rmeas | 0.435 | 8.776 |
Number of reflections | 30677 | 3054 |
<I/σ(I)> | 13.6 | 1.3 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 79.5 | 76.9 |
CC(1/2) | 0.998 | 0.756 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 6 | 293 | 50 mM NaCl, 0.1 M Na-citrate, pH 6.0, 18-22 % PEG400 |