7E57
Crystal structure of murine GITR-GITRL complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-04-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.03923 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.386, 62.564, 85.756 |
Unit cell angles | 90.00, 116.23, 90.00 |
Refinement procedure
Resolution | 38.463 - 3.302 |
R-factor | 0.2782 |
Rwork | 0.276 |
R-free | 0.32410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2q8o 6a3v |
RMSD bond length | 0.003 |
RMSD bond angle | 0.701 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.420 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.094 | 0.778 |
Number of reflections | 77449 | |
<I/σ(I)> | 19.29 | |
Completeness [%] | 85.0 | |
Redundancy | 6.9 | |
CC(1/2) | 0.856 | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.02M nickel (II) chloride hexahydrate, 0.02M magnesium chloride hexahydrate, 0.02M cadmium chloride hydrate, 0.1M sodium acetate trihydrate, pH4.1, 20% w/v polyethylene glycol monomethyl ether 2000 |